References

Alroy J (2015) Current extinction rates of reptiles and amphibians. Proc Natl Acad Sci U S A 112 (42):13003-13008

Ameni G, Terefe W (2004) A cross-sectional study of epizootic lymphangitis in cart-mules in western Ethiopia.

Blehert DS, Hicks AC, Behr M, Meteyer CU, Berlowski-Zier BM, Buckles EL, Coleman JTH, Darling SR, Gargas A, Niver R, Okoniewski JC, Rudd RJ, Stone WB (2009) Bat white-nose syndrome: an emerging fungal pathogen? Science 323(5911):227-227

Briggs CJ, Knapp RA, Vredenburg VT (2010) Enzootic and epizootic dynamics of the chytrid fungal pathogen of amphibians. Proc Natl Acad Sci USA 107(21):9695-9700

Brown AJ, Brown GD, Netea MG, Gow NA (2014) Metabolism impacts upon Candida immuno­genicity and pathogenicity at multiple levels. Trends Microbiol 22(11):614-622

Casadevall A, Pirofski LA (2003) The damage-response framework of microbial pathogenesis. Nat Rev Microbiol 1(1):17-24

Cao CW, Liang L, Wang WJ, Luo H, Huang SB, Liu DH, Xu JP, Henk DA, Fisher MC (2011) Common reservoirs for Penicillium marneffei infection in humans and rodents, China. Emerg Infect Dis 17(2):209-214

Clare F, Daniel OZ, Garner TWJ, Fisher MC (2016) Assessing the ability of swab data to determine the true burden of infection for the amphibian pathogen Batrachochytrium dendrobatidis. Ecohealth 13:360-367

Daszak P, Cunningham AA, Hyatt AD (2000) Emerging infectious diseases of wildlife - threats to biodiversity and human health. Science 287:443-449

Doddington BJ, Bosch J, Oliver JA, Grassly NC, Garcia G, Schmidt BR, Garner TWJ, Fisher MC (2013) Context-dependent amphibian host population response to an invading pathogen. Ecology 94(8):1795-1804

Farrer RA, Desjardins CA, Sakthikumar S, Gujja S, Saif S, Zeng Q, Chen Y, Voelz K, Heitman J, May RC, Fisher MC, Cuomo CA (2015) Genome evolution and innovation across the four major lineages of Cryptococcus gattii.

Fehr M (2015) Zoonotic potential of Dermatophytosis in small mammals. J Exot Pet Med 24 (3):308-316

Fisher MC, Garner TWJ (2007) The relationship between the introduction of Batrachochytrium dendrobatidis, the international trade in amphibians and introduced amphibian species. Fungal Biol Rev 21:2-9

Fisher MC, Garner TWJ, Walker SF (2009) Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host. Annu Rev Microbiol 63:291-310

Fisher MC, Henk DA, Briggs CJ, Brownstein JS, Madoff LC, McCraw SL, Gurr SJ (2012) Emerging fungal threats to animal, plant and ecosystem health. Nature 484(7393):186-194

Fisher MC, Koenig GL, White TJ, San-Blas G, Negroni R, Alvarez IG, Wanke B, Taylor JW (2001) Biogeographic range expansion into South America by Coccidioides immitis mirrors new world patterns of human migration. Proc Natl Acad Sci USA 98(8):4558-4562

Fisher MC, Koenig GL, White TJ, Taylor JW (2002) Molecular and phenotypic description of Coccidioides posadasii sp nov., previously recognized as the non-California population of Coccidioides immitis. Mycologia 94(1):73-84

Gabal MA, Hennager S (1983) Study on the survival of Histoplasma farciminosum in the environ­ment. Mykosen 26(9):481-487

Garner TW, Walker S, Bosch J, Leech S, Rowcliffe M, Cunningham AA, Fisher MC (2009) Life history trade-offs influence mortality associated with the amphibian pathogen Batrachochytrium dendrobatidis. Oikos 118:783-791

Gugnani H, Fisher MC, Paliwal-Johsi A, Vanittanakom N, Singh I, Yadav PS (2004) Role of Cannomys badius as a natural animal host of Penicillium marneffei in India. J Clin Microbiol 42 (11):5070-5075

Gurr SJ, Samalova M, Fisher MC (2011) The rise and rise of emerging infectious fungi challenges food security and ecosystem health. Fungal Biol Rev 25(4):181-188

Henk DA, Fisher MC (2011) Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis. PLoS One 6(8):e22883

Henk DA, Shahar-Golan R, Devi KR, Boyce KJ, Zhan NY, Fedorova ND, Nierman WC, Hsueh PR, Yuen KY, Sieu TPM, Kinh NV, Wertheim H, Baker SG, Day JN, Vanittanakom N, Bignell EM, Andrianopoulos A, Fisher MC (2012) Clonality despite sex: the evolution of host- associated sexual neighborhoods in the pathogenic fungus Penicillium marneffei.

Heymann DL (2014) Control of communicable diseases manual, 20th edn. Alpha Press, Washington, DC

Jones KE, Patel NG, Levy MA, Storeygard A, Balk D, Gittleman JL, Daszak P (2008) Global trends in emerging infectious diseases. Nature 451(7181):990-993

Joneson S, Stajich JE, Shiu SH, Rosenblum EB (2011) Genomic transition to pathogenicity in Chytrid fungi. PLoS Pathog 7(11):e1002338

Ma HS, Hagen F, Stekel DJ, Johnston SA, Sionov E, Falk R, Polacheck I, Boekhout T, May RC (2009) The fatal fungal outbreak on Vancouver Island is characterized by enhanced intracellular parasitism driven by mitochondrial regulation. Proc Natl Acad SciU S A 106(31):12980-12985

Martel A, Spitzen-van der Sluijs A, Blooi M, Bert W, Ducatelle R, Fisher MC, Woeltjes A, Bosman W, Chiers K, Bossuyt F, Pasmans F (2013) Batrachochytrium Salamandrivorans sp nov causes lethal Chytridiomycosis in amphibians. Proc Natl Acad Sci U S A 110(38):15325-15329

Mathis A, Weber R, Deplazes P (2005) Zoonotic potential of the microsporidia. Clin Microbiol Rev 18(3):423-445

Moyes DL, Wilson D, Richardson JP, Mogavero S, Tang SX, Wernecke J, Hofs S, Gratacap RL, Robbins J, Runglall M, Murciano C, Blagojevic M, Thavaraj S, Forster TM, Hebecker B, Kasper L, Vizcay G, Iancu SI, Kichik N, Hader A, Kurzai O, Luo T, Kruger T, Kniemeyer O, Cota E, Bader O, Wheeler RT, Gutsmann T, Hube B, Naglik JR (2016) Candidalysin is a fungal peptide toxin critical for mucosal infection. Nature 532(7597):64-68

Olsen LA, Choffnes ER, Relman DA, Pray L (2011) Fungal diseases: an emerging threat to human, animal, and plant health. The National Academies Press, Washington, DC

Pappagianis D (1988) Epidemiology of coccidioidomycosis. Curr Top Med Mycol 2:199-238

Retallick RW, McCallum H, Speare R (2004) Endemic infection of the amphibian chytrid fungus in a frog community post-decline. PLoS Biol 2(11):e351

Rodrigues AM, De Hoog GS, Zhang Y, de Camargo ZP (2014) Emerging sporotrichosis is driven by clonal and recombinant Sporothrix species.

Rosenberg R, Beard CB (2011) Vector-borne infections. Emerg Infect Dis 17(5):769-770

Shelburne SA 3rd, Darcourt J, White AC Jr, Greenberg SB, Hamill RJ, Atmar RL, Visnegarwala F (2005) The role of immune reconstitution inflammatory syndrome in AIDS-related Cryptococ­cus neoformans disease in the era of highly active antiretroviral therapy. Clin Infect Dis 40 (7):1049-1052

Sil A, Andrianopoulos A (2015) Thermally dimorphic human fungal pathogens - polyphyletic pathogens with a convergent pathogenicity trait. Cold Spring Harb Perspect Med 5(8):a019794

Taylor LH, Latham SM, Woolhouse MEJ (2001) Risk factors for human disease emergence. Philos Trans R Soc Lond B 356:983-989. https://doi.org/10.1098/rstb.2001.0888. Published 29 July 2001

Vanittanakom N, Cooper CR Jr, Fisher MC, Sirisanthana T (2006) Penicillium marneffei infection and recent advances in the epidemiology and molecular biology aspects. Clin Microbiol Rev 19 (1):95-110

Vredenburg VT, Knapp RA, Tunstall TS, Briggs CJ (2010) Dynamics of an emerging disease drive large-scale amphibian population extinctions. Proc Natl Acad Sci USA 107(21):9689-9694

Walker SF, Bosch J, James TY, Litvintseva AP, Valls JAO, Pina S, Garcia G, Rosa GA, Cunningham AA, Hole S, Griffiths R, Fisher MC (2008) Invasive pathogens threaten species recovery programs. Curr Biol 18(18):R853-R854