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References

[1] Willis MB,. Genetics of the dog. Howell Book House. 1989; New York, USA.

[2] Berryere TG, Kerns JA, Barsh GS, Schmutz SM. Association of agouti allele with fawn or sable coat color in domestic dogs.

Mamm Genom. 2005; 16: 262-272.

[3] Mellanby RJ, Ogden R, Clements DN, French AT, Gow AG, Powell R, Corcoran B, Schoeman JP, Summers KM. Population structure and genetic heterogeneity in popular dog breeds in the UK. Vet J. 2013; 196(1):92-97.

[4] Zhang Q, Calus MPL, Guldbrandtsen B, Lund MS,

Sahana G. Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds. BMC Genet. 2015; 16:88.

[5] Wang J. Pedigrees or markers: Which are better in estimating relatedness and inbreeding coefficient? Theor Popul Biol. 2016; 107: 4-13.

[6] Jansson M, Laikre L. Pedigree data indicate rapid inbreeding and loss of genetic diversity within populations of native, traditional dog breeds of conservation concern. Plos one. 2018; 13(9): e0202849.

[7] Lewis TW, AbhayaratneBM, BlottSC. Trends in genetic diversity for all Kennel Club registered pedigree dog breeds. Canine Genet Epidemiol. 2015; 2:13.

[8] Leroy G, Phocas F, Hedan B, Verrier E, Rognon X. Inbreeding impact on litter size and survival in selected canine breeds. Vet J. 2015; 203:74-78.

[9] Leroy G. Genetic diversity, inbreeding and breeding practices in dogs: Results from pedigree analyses. Vet J. 2011; 189:177-182.

[10] Berg P, Nielsen J, Sorensen MK. EVA: Realized and predicted optimal genetic contributions. WCGALP. 2006; 246.

[11] Czerwinski V, McArthur V, Smith B, Hynd P, Susan Hazel S. Selection of breeding stock among Australian purebred dog breeders, with particular emphasis on the dam. Animals. 2016;

6: 75.

[12] Bellumori TP, Famula TR, Bannasch DL, Belanger JM;

Oberbauer AM, Bellumori TP, Famula TR Bannasch DL, Belanger JM, Oberbauer AM.

J Am Vet Med Assoc. 2013; 242:1549-1555.

[13] Oberbauer AM, Belanger JM, Bellumori T, Bannasch DL, FamulaTR. Ten inherited disorders in purebred dogs by functional breed groupings. Canine Genet Epidemiol. 2015; 2:9.

[14] Avise JC. Perspective: conservation genetics enters the genomics era. Cons Genet. 2010; 11:665-669.

[15] Duleba A, Skonieczna K, Bogdanowicz W, Malyarchuk B, Grzybowski T. Complete mitochondrial genome database and standardized classification system for Canis lupus familiaris. Forensic Sci Int-Gen. 2015;

19:123-129.

[16] Ersmark E, Klutsch CFC, Chan YL, Sinding M-H S, Fain SR, Illarionova NA. From the past to the present: Wolf phylogeography and demographic history based on the mitochondrial control region. Front Ecol Evol. 2016; 4:134.

[17] Hendrickson M, Remm J, Pilot M, Godinho R, Stronen AV, Baltrunaite L. Wolf population genetics in Europe:

a systematic review, meta-analysis and suggestions for conservation and management. Biol Rev. 2017; 92:1601-1629.

[18] Toth G, Gaspari Z, Jurka J. Microsatellites in different eukaryotic genomes: survey and analysis. Genome Res. 2000; 10:967-981.

[19] Zane L, Bargelloni L, Patarnello T. Strategies for microsatellite isolation: a review. Mol Ecol. 2002; 11:1-16.

[20] Estoup A, Rousset F, Michalakis Y, Cornuet J-M, Adriamanga M, Guyomard R. Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta). Mol Ecol. 1998; 7:339-353.

[21] Grabherr M, Haas B,

Yassour M,LevinJ, Thompson D, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng QTrinityueconstructing full­length transcriptome without a genome from RNA-Seq data. Nat Biotechnol. 2011; 29(7):644-652.

[22] Martin SH, Davey JW, Jiggins CD, Evaluating the use of ABBA-BABA statistics to locate introgressed loci. Mol. Biol. Evol. 2015; 32:244-257.

[23] Lu F, Lipka AE, Glaubitz J, Elshire R, Cherney JH, Casler MD. Switchgrass Genomic Diversity, Ploidy, and Evolution: Novel Insights from a Network-Based SNP Discovery Protocol.

Plos Genet. 2013; 9(1):e1003215.

[24] Baird NA, Etter PD, Atwood TS

et al. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. Plos one. 2008; 3: e3376.

[25] Daetwyler HD, Hickey JM, Henshall JM, Dominik S, Gredler B. Accuracy of estimated genomic breeding values for wool and meat traits in a multi-breed sheep population. Anim Prod Sci. 2010; 50:1004-1010.

[26] Ramos AM, Crooijmans RPMA, Affara NA, Amaral A J, Archibald AL. ration sequencing technology. Plos one. 2009; 4: e6524.

[27] Meuwissen THE. Genomic selection: marker assisted selection on a genome wide scale. J Anim Breed Genet. 2007; 124: 321-322.

[28] Doherty A, Lopes, Ford CT, Monaco G, Guest P, de Magalhaes JP. A scan for genes associated with cancer mortality and longevity in pedigree dog breeds. Mamm Genome. 2020; 31:215-227.

[29] Plassais J, Kim j, Davis BW, Karyadi DM, Hogan AN, HarrisAC, Decker B, Parker HG, Ostrander EA. Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology. Nature Comm. 2019; 10:1489.

[30] Ali MB, Evans JM, Parker HG, Kim J, Pearce-Kelling S, Whitaker DT, et al. (2020) Genetic analysis of the modern Australian labradoodle dog breed reveals an excess of the poodle genome. PLoS Genet. 2020; 16(9): e1008956.

[31] Vonholdt BM, Pollinger JP, Lohmueller KE, et al. Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication. Nature. 2010; 464:898-902.

[32] Wayne RK, Ostrander EA. Lessons learned from the dog genome. Trends in Genet. 2007; 23:11.

[33] Kim J, Williams FJ, Dreger DL, Plassais J, Davis BW, Parker HG, Ostrander EA. Genetic selection of athletic success in sport-hunting dogs. Pnas. 2018; 115:30.

[34] Parker HG, Dreger DL, Rimbault M, Davis BW, Mullen AB, Carpintero-Ramirez G, Ostrander EA. Genomic analyses reveal the influence of geographic origin migration, and hybridization on modern dog breed development. Cell Rep. 2017; 19: 697-708.

[35] Chase K, Carrier DR, Adler FR, Jarvik T, Ostrander EA, Lorentzen TD, Lark KG.

Genetic basis for systems of skeletal quantitative traits: Principal component analysis of the canid skeleton. Pnas. 2002; 99(15):9930-9935.

[36] Chase K, Carrier DR, Adler FR, Ostrander EA, Lark KG. Interaction between the X chromosome and

an autosome regulates size sexual dimorphism in Portuguese Water Dogs. Genome Research. 2005; 15:1820-1824.

[37] Lindblad-Toh K., Wade CM, Lander ES. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature. 2005; 438:803-819.

[38] Rimbault M, Beale HC, Schoenebeck JJ, Hoopes BC, Allen JJ, Kilroy-Glynn P, Wayne RK, Sutter NB, Ostrander EA. Derived variants at

six genes explain nearly half of size reduction in dog breeds. Genome Res. 2013; 23:1985-1995.

[39] Parker HG, Meurs KM, Ostrander EA. Finding cardiovascular disease genes in the dog. J Vet Cardiol. 2006; 8:115-127.

[40] Parker HG and Ostrander FA. Canine genomics and genetics: Running with the pack. Plos Genet. 2005;1(5):e58, 2005.

[41] Dreger DL, Davis BW, Cocco R, Sechi S, Di Cerbo A, Parker HG, et al. Commonalities in development of pure breeds and population isolates revealed in the genome of the Sardinian Fonnis Dog. Genetics. 2016; 204:737-55.

[42] Ostrander EA, Wayne RK, Freedman A H, Davis BW. Demographic history, selection and functional diversity of the canine genome. Nat Rev Genet. 2017; 18:705-720.

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Source: Rutland Catrin (ed.). Canine Genetics, Health and Medicine. ITexLi,2021. — 165 p.. 2021

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